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Update Workflow management

Lucas FRÉROT 2024-12-15 17:06:25 +00:00
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Workflow-management.md

@ -196,4 +196,6 @@ Here are [documentation](https://www.gnu.org/software/make/manual/html_node/inde
- [Wildcards](https://www.gnu.org/software/make/manual/html_node/Wildcards.html) are semantically different from wildcards in Snakemake - [Wildcards](https://www.gnu.org/software/make/manual/html_node/Wildcards.html) are semantically different from wildcards in Snakemake
- [Pattern rules](https://www.gnu.org/software/make/manual/html_node/Pattern-Intro.html) correspond to wildcards in Snakemake - [Pattern rules](https://www.gnu.org/software/make/manual/html_node/Pattern-Intro.html) correspond to wildcards in Snakemake
- [Automatic variables](https://www.gnu.org/software/make/manual/html_node/Automatic-Variables.html) correspond to the symbols `$@`, `$<` and `$*` in the example - [Automatic variables](https://www.gnu.org/software/make/manual/html_node/Automatic-Variables.html) correspond to the symbols `$@`, `$<` and `$*` in the example
- [Grouped targets](https://www.gnu.org/software/make/manual/html_node/Multiple-Targets.html) - [Grouped targets](https://www.gnu.org/software/make/manual/html_node/Multiple-Targets.html)
One important advantage of Snakemake is the ability to define arbitrarily many wildcards (Make's patterns) in a single rule. Multi-pattern rules do not directly exist in Make. Emulating this feature is [cumbersome](https://stackoverflow.com/questions/3745177/multi-wildcard-pattern-rules-of-gnu-make).